Disease:
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Fetched 2023-07-05 07:03:08 GMT
Verified with cwltool version 3.1.20230601100705
- Selected
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- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| inputModule1 | File |
Python implementation unit |
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| inputModule2 | File |
Python implementation unit |
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| inputModule3 | File |
Python implementation unit |
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| inputModule4 | File |
Python implementation unit |
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| inputModule5 | File |
Python implementation unit |
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| inputModule6 | File |
Python implementation unit |
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| inputModule7 | File |
Python implementation unit |
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| inputModule8 | File |
Python implementation unit |
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| inputModule9 | File |
Python implementation unit |
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| inputModule10 | File |
Python implementation unit |
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| inputModule11 | File |
Python implementation unit |
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| inputModule12 | File |
Python implementation unit |
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| inputModule13 | File |
Python implementation unit |
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| inputModule14 | File |
Python implementation unit |
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| inputModule15 | File |
Python implementation unit |
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| inputModule16 | File |
Python implementation unit |
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| inputModule17 | File |
Python implementation unit |
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| inputModule18 | File |
Python implementation unit |
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| inputModule19 | File |
Python implementation unit |
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| inputModule20 | File |
Python implementation unit |
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| inputModule21 | File |
Python implementation unit |
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| inputModule22 | File |
Python implementation unit |
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| inputModule23 | File |
Python implementation unit |
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| inputModule24 | File |
Python implementation unit |
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| inputModule25 | File |
Python implementation unit |
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| inputModule26 | File |
Python implementation unit |
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| potentialCases | File |
Input of potential cases for processing |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| covid19---tadds |
covid19---tadds.cwl
(CommandLineTool)
|
Identify Covid19 - TADDS |
|
| covid19-result---tadds |
covid19-result---tadds.cwl
(CommandLineTool)
|
Identify Covid19 result - TADDS |
|
| covid19-exposure---tadds |
covid19-exposure---tadds.cwl
(CommandLineTool)
|
Identify Covid19 exposure - TADDS |
|
| positive-covid19---tadds |
positive-covid19---tadds.cwl
(CommandLineTool)
|
Identify Positive Covid19 - TADDS |
|
| covid19-confirmed---tadds |
covid19-confirmed---tadds.cwl
(CommandLineTool)
|
Identify Covid19 confirmed - TADDS |
|
| covid19-suspected---tadds |
covid19-suspected---tadds.cwl
(CommandLineTool)
|
Identify Covid19 suspected - TADDS |
|
| long-covid---tadds-exclude |
long-covid---tadds-exclude.cwl
(CommandLineTool)
|
Exclude Long covid - TADDS |
|
| covid19-coronavirus---tadds |
covid19-coronavirus---tadds.cwl
(CommandLineTool)
|
Identify Covid19 coronavirus - TADDS |
|
| covid19-hospitalisation---hes-exclude |
covid19-hospitalisation---hes-exclude.cwl
(CommandLineTool)
|
Exclude Covid19 hospitalisation - HES |
|
| long-covid-assessment---tadds-exclude |
long-covid-assessment---tadds-exclude.cwl
(CommandLineTool)
|
Exclude Long covid assessment - TADDS |
|
| long-covid-symptoms---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-cough---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-cough---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms cough (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-fever---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-fever---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms fever (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-smell---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-smell---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms smell (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-muscle---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-muscle---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms muscle (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-anxiety---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-anxiety---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms anxiety (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-headache---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-headache---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms headache (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-sleeping---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-sleeping---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms sleeping (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-vomiting---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-vomiting---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms vomiting (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-confusion---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-confusion---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms confusion (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-diarrhoea---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-diarrhoea---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms diarrhoea (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-dizziness---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-dizziness---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms dizziness (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-tiredness---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-tiredness---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms tiredness (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-palpitations---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-palpitations---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms palpitations (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| long-covid-symptoms-concentrating---tadds-31-to-186-days-after-covid19 |
long-covid-symptoms-concentrating---tadds-31-to-186-days-after-covid19.cwl
(CommandLineTool)
|
Diagnosis of Long covid symptoms concentrating (TADDS) between 31 and 186 days after a diagnosis of Covid19 |
|
| output-diagnosis-of-long-covid-symptoms-31-days-to-186-days-after-covid19-without-a-record-of-long-covid-and-covid19-hospitalisation-cases |
output-diagnosis-of-long-covid-symptoms-31-days-to-186-days-after-covid19-without-a-record-of-long-covid-and-covid19-hospitalisation-cases.cwl
(CommandLineTool)
|
Output cases |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| output | File |
https://w3id.org/cwl/view/git/91cbaa733d29a9a2bbc1ee456b72cd4eb761c3b2/Long-covid---6d69f6c0-0234-11ee-8bae-fdbbba1878cc/Long-covid.cwl
