Disease:
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Fetched 2026-04-15 03:31:15 GMT
Verified with cwltool version 3.1.20241112140730
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
MIT License
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| inputModule1 | File |
Js implementation unit |
|
| inputModule2 | File |
Python implementation unit |
|
| inputModule3 | File |
Python implementation unit |
|
| inputModule4 | File |
Python implementation unit |
|
| inputModule5 | File |
Python implementation unit |
|
| inputModule6 | File |
Python implementation unit |
|
| inputModule7 | File |
Python implementation unit |
|
| inputModule8 | File |
Python implementation unit |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| output-cases |
output-cases.cwl
(CommandLineTool)
|
Output cases |
|
| bowel---primary |
bowel---primary.cwl
(CommandLineTool)
|
Identify Bowel - primary |
|
| read-potential-cases-fhir |
read-potential-cases-fhir.cwl
(CommandLineTool)
|
Read potential cases from a FHIR server. |
|
| large-secondary-malignancy_bowel---primary |
large-secondary-malignancy_bowel---primary.cwl
(CommandLineTool)
|
Identify Large Secondary Malignancy_Bowel - primary |
|
| small-secondary-malignancy_bowel---primary |
small-secondary-malignancy_bowel---primary.cwl
(CommandLineTool)
|
Identify Small Secondary Malignancy_Bowel - primary |
|
| secondary-malignancy_bowel-rectum---primary |
secondary-malignancy_bowel-rectum---primary.cwl
(CommandLineTool)
|
Identify Secondary Malignancy_Bowel rectum - primary |
|
| secondary-malignancy_bowel-duodenum---primary |
secondary-malignancy_bowel-duodenum---primary.cwl
(CommandLineTool)
|
Identify Secondary Malignancy_Bowel duodenum - primary |
|
| secondary-malignancy_bowel-neoplasm---primary |
secondary-malignancy_bowel-neoplasm---primary.cwl
(CommandLineTool)
|
Identify Secondary Malignancy_Bowel neoplasm - primary |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| cases | File |
Permalink:
https://w3id.org/cwl/view/git/ca59f9e9fe8037b88081ae8ba22eae7b75ae72c6/Secondary-Malignancy_Bowel.cwl
