Disease:
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Fetched 2025-07-08 21:32:46 GMT
Verified with cwltool version 3.1.20240508115724
- Selected
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- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| inputModule1 | File |
Js implementation unit |
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| inputModule2 | File |
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| inputModule3 | File |
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| inputModule4 | File |
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| inputModule5 | File |
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| inputModule6 | File |
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| inputModule7 | File |
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| inputModule8 | File |
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| inputModule9 | File |
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| inputModule10 | File |
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| inputModule11 | File |
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| inputModule12 | File |
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| inputModule13 | File |
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| inputModule14 | File |
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| inputModule15 | File |
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| inputModule16 | File |
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| inputModule17 | File |
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| inputModule18 | File |
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| inputModule19 | File |
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| inputModule20 | File |
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| inputModule21 | File |
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| inputModule22 | File |
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| inputModule23 | File |
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| inputModule24 | File |
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| inputModule25 | File |
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| inputModule26 | File |
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| inputModule27 | File |
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| inputModule28 | File |
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| inputModule29 | File |
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| inputModule30 | File |
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| inputModule31 | File |
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| inputModule32 | File |
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| inputModule33 | File |
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| inputModule34 | File |
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| inputModule35 | File |
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| inputModule36 | File |
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| inputModule37 | File |
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| inputModule38 | File |
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| inputModule39 | File |
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| inputModule40 | File |
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| inputModule45 | File |
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| inputModule46 | File |
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| inputModule47 | File |
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| inputModule48 | File |
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| inputModule49 | File |
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| inputModule50 | File |
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| inputModule51 | File |
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| inputModule52 | File |
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| inputModule53 | File |
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| inputModule54 | File |
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| inputModule55 | File |
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| inputModule56 | File |
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| inputModule57 | File |
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| inputModule58 | File |
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| inputModule59 | File |
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| inputModule60 | File |
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| inputModule61 | File |
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| inputModule62 | File |
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| inputModule63 | File |
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| inputModule64 | File |
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| inputModule65 | File |
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| inputModule66 | File |
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| inputModule67 | File |
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| inputModule68 | File |
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| inputModule69 | File |
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Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| output-cases |
output-cases.cwl
(CommandLineTool)
|
Output cases |
|
| substance---primary |
substance---primary.cwl
(CommandLineTool)
|
Identify Substance - primary |
|
| read-potential-cases-omop |
read-potential-cases-omop.cwl
(CommandLineTool)
|
Read potential cases from an OMOP db. |
|
| other-psychoactive-substance-misuse---primary |
other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse - primary |
|
| daily-other-psychoactive-substance-misuse---primary |
daily-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Daily Other psychoactive substance misuse - primary |
|
| major-other-psychoactive-substance-misuse---primary |
major-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Major Other psychoactive substance misuse - primary |
|
| other-psychoactive-substance-misuse-abuse---primary |
other-psychoactive-substance-misuse-abuse---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse abuse - primary |
|
| other-psychoactive-substance-misuse-crack---primary |
other-psychoactive-substance-misuse-crack---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse crack - primary |
|
| opioid-other-psychoactive-substance-misuse---primary |
opioid-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Opioid Other psychoactive substance misuse - primary |
|
| other-psychoactive-substance-misuse-addict---primary |
other-psychoactive-substance-misuse-addict---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse addict - primary |
|
| other-psychoactive-substance-misuse-harmfl---primary |
other-psychoactive-substance-misuse-harmfl---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse harmfl - primary |
|
| other-psychoactive-substance-misuse-heroin---primary |
other-psychoactive-substance-misuse-heroin---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse heroin - primary |
|
| other-psychoactive-substance-misuse-opiate---primary |
other-psychoactive-substance-misuse-opiate---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse opiate - primary |
|
| weekly-other-psychoactive-substance-misuse---primary |
weekly-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Weekly Other psychoactive substance misuse - primary |
|
| adverse-other-psychoactive-substance-misuse---primary |
adverse-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Adverse Other psychoactive substance misuse - primary |
|
| initial-other-psychoactive-substance-misuse---primary |
initial-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Initial Other psychoactive substance misuse - primary |
|
| other-psychoactive-substance-misuse-cocaine---primary |
other-psychoactive-substance-misuse-cocaine---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse cocaine - primary |
|
| other-psychoactive-substance-misuse-disordr---primary |
other-psychoactive-substance-misuse-disordr---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse disordr - primary |
|
| other-psychoactive-substance-misuse-ecstasy---primary |
other-psychoactive-substance-misuse-ecstasy---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse ecstasy - primary |
|
| other-psychoactive-substance-misuse-history---primary |
other-psychoactive-substance-misuse-history---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse history - primary |
|
| other-psychoactive-substance-misuse-injects---primary |
other-psychoactive-substance-misuse-injects---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse injects - primary |
|
| other-psychoactive-substance-misuse-misuser---primary |
other-psychoactive-substance-misuse-misuser---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse misuser - primary |
|
| other-psychoactive-substance-misuse-stopped---primary |
other-psychoactive-substance-misuse-stopped---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse stopped - primary |
|
| other-psychoactive-substance-misuse-therapy---primary |
other-psychoactive-substance-misuse-therapy---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse therapy - primary |
|
| solvent-other-psychoactive-substance-misuse---primary |
solvent-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Solvent Other psychoactive substance misuse - primary |
|
| clinical-other-psychoactive-substance-misuse---primary |
clinical-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Clinical Other psychoactive substance misuse - primary |
|
| episodic-other-psychoactive-substance-misuse---primary |
episodic-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Episodic Other psychoactive substance misuse - primary |
|
| other-psychoactive-substance-misuse-activity---primary |
other-psychoactive-substance-misuse-activity---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse activity - primary |
|
| other-psychoactive-substance-misuse-cannabis---primary |
other-psychoactive-substance-misuse-cannabis---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse cannabis - primary |
|
| other-psychoactive-substance-misuse-declined---primary |
other-psychoactive-substance-misuse-declined---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse declined - primary |
|
| other-psychoactive-substance-misuse-delirium---primary |
other-psychoactive-substance-misuse-delirium---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse delirium - primary |
|
| other-psychoactive-substance-misuse-paranoia---primary |
other-psychoactive-substance-misuse-paranoia---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse paranoia - primary |
|
| other-psychoactive-substance-misuse-reaction---primary |
other-psychoactive-substance-misuse-reaction---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse reaction - primary |
|
| other-psychoactive-substance-misuse-sniffing---primary |
other-psychoactive-substance-misuse-sniffing---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse sniffing - primary |
|
| personal-other-psychoactive-substance-misuse---primary |
personal-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Personal Other psychoactive substance misuse - primary |
|
| positive-other-psychoactive-substance-misuse---primary |
positive-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Positive Other psychoactive substance misuse - primary |
|
| previous-other-psychoactive-substance-misuse---primary |
previous-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Previous Other psychoactive substance misuse - primary |
|
| referral-other-psychoactive-substance-misuse---primary |
referral-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Referral Other psychoactive substance misuse - primary |
|
| sedative-other-psychoactive-substance-misuse---primary |
sedative-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Sedative Other psychoactive substance misuse - primary |
|
| other-psychoactive-substance-misuse-behaviour---primary |
other-psychoactive-substance-misuse-behaviour---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse behaviour - primary |
|
| other-psychoactive-substance-misuse-completed---primary |
other-psychoactive-substance-misuse-completed---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse completed - primary |
|
| other-psychoactive-substance-misuse-hypnotics---primary |
other-psychoactive-substance-misuse-hypnotics---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse hypnotics - primary |
|
| other-psychoactive-substance-misuse-methadone---primary |
other-psychoactive-substance-misuse-methadone---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse methadone - primary |
|
| other-psychoactive-substance-misuse-remission---primary |
other-psychoactive-substance-misuse-remission---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse remission - primary |
|
| other-psychoactive-substance-misuse-specified---primary |
other-psychoactive-substance-misuse-specified---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse specified - primary |
|
| other-psychoactive-substance-misuse-stimulant---primary |
other-psychoactive-substance-misuse-stimulant---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse stimulant - primary |
|
| other-psychoactive-substance-misuse-treatment---primary |
other-psychoactive-substance-misuse-treatment---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse treatment - primary |
|
| anxiolytic-other-psychoactive-substance-misuse---primary |
anxiolytic-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Anxiolytic Other psychoactive substance misuse - primary |
|
| continuous-other-psychoactive-substance-misuse---primary |
continuous-other-psychoactive-substance-misuse---primary.cwl
(CommandLineTool)
|
Identify Continuous Other psychoactive substance misuse - primary |
|
| other-psychoactive-substance-misuse-amfetamine---primary |
other-psychoactive-substance-misuse-amfetamine---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse amfetamine - primary |
|
| other-psychoactive-substance-misuse-assessment---primary |
other-psychoactive-substance-misuse-assessment---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse assessment - primary |
|
| other-psychoactive-substance-misuse-dependence---primary |
other-psychoactive-substance-misuse-dependence---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse dependence - primary |
|
| other-psychoactive-substance-misuse-infrequent---primary |
other-psychoactive-substance-misuse-infrequent---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse infrequent - primary |
|
| other-psychoactive-substance-misuse-monitoring---primary |
other-psychoactive-substance-misuse-monitoring---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse monitoring - primary |
|
| other-psychoactive-substance-misuse-amphetamine---primary |
other-psychoactive-substance-misuse-amphetamine---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse amphetamine - primary |
|
| other-psychoactive-substance-misuse-barbiturate---primary |
other-psychoactive-substance-misuse-barbiturate---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse barbiturate - primary |
|
| other-psychoactive-substance-misuse-counselling---primary |
other-psychoactive-substance-misuse-counselling---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse counselling - primary |
|
| other-psychoactive-substance-misuse-druginduced---primary |
other-psychoactive-substance-misuse-druginduced---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse druginduced - primary |
|
| other-psychoactive-substance-misuse-drugrelated---primary |
other-psychoactive-substance-misuse-drugrelated---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse drugrelated - primary |
|
| other-psychoactive-substance-misuse-maintenance---primary |
other-psychoactive-substance-misuse-maintenance---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse maintenance - primary |
|
| other-psychoactive-substance-misuse-reinduction---primary |
other-psychoactive-substance-misuse-reinduction---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse reinduction - primary |
|
| other-psychoactive-substance-misuse-substitution---primary |
other-psychoactive-substance-misuse-substitution---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse substitution - primary |
|
| other-psychoactive-substance-misuse-buprenorphine---primary |
other-psychoactive-substance-misuse-buprenorphine---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse buprenorphine - primary |
|
| other-psychoactive-substance-misuse-hallucinatory---primary |
other-psychoactive-substance-misuse-hallucinatory---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse hallucinatory - primary |
|
| other-psychoactive-substance-misuse-hallucinogens---primary |
other-psychoactive-substance-misuse-hallucinogens---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse hallucinogens - primary |
|
| other-psychoactive-substance-misuse-tranquilliser---primary |
other-psychoactive-substance-misuse-tranquilliser---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse tranquilliser - primary |
|
| other-psychoactive-substance-misuse-antidepressant---primary |
other-psychoactive-substance-misuse-antidepressant---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse antidepressant - primary |
|
| other-psychoactive-substance-misuse-benzodiazepine---primary |
other-psychoactive-substance-misuse-benzodiazepine---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse benzodiazepine - primary |
|
| other-psychoactive-substance-misuse-detoxification---primary |
other-psychoactive-substance-misuse-detoxification---primary.cwl
(CommandLineTool)
|
Identify Other psychoactive substance misuse detoxification - primary |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| cases | File |
https://w3id.org/cwl/view/git/3ddb84da422d20123fa3c701fc9feddbdc53713f/Other-psychoactive-substance-misuse.cwl
