Disease:
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Fetched 2026-10-08 10:26:17 GMT
Verified with cwltool version 3.1.20241112140730
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| inputModule1 | File |
Js implementation unit |
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| inputModule2 | File |
Python implementation unit |
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| inputModule3 | File |
Python implementation unit |
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| inputModule4 | File |
Python implementation unit |
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| inputModule5 | File |
Python implementation unit |
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| inputModule6 | File |
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| inputModule7 | File |
Python implementation unit |
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| inputModule8 | File |
Python implementation unit |
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| inputModule9 | File |
Python implementation unit |
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| inputModule10 | File |
Python implementation unit |
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| inputModule11 | File |
Python implementation unit |
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| inputModule12 | File |
Python implementation unit |
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| inputModule13 | File |
Python implementation unit |
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| inputModule14 | File |
Python implementation unit |
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| inputModule15 | File |
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| inputModule16 | File |
Python implementation unit |
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| inputModule17 | File |
Python implementation unit |
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| inputModule18 | File |
Python implementation unit |
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| inputModule19 | File |
Python implementation unit |
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| inputModule20 | File |
Python implementation unit |
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| inputModule21 | File |
Python implementation unit |
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| inputModule22 | File |
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| inputModule23 | File |
Python implementation unit |
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| inputModule24 | File |
Python implementation unit |
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| inputModule25 | File |
Python implementation unit |
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| inputModule26 | File |
Python implementation unit |
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| inputModule27 | File |
Python implementation unit |
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| inputModule28 | File |
Python implementation unit |
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| inputModule29 | File |
Python implementation unit |
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| inputModule30 | File |
Python implementation unit |
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| inputModule31 | File |
Python implementation unit |
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| inputModule32 | File |
Python implementation unit |
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| inputModule33 | File |
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| inputModule34 | File |
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| inputModule35 | File |
Python implementation unit |
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| inputModule36 | File |
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| inputModule37 | File |
Python implementation unit |
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| inputModule38 | File |
Python implementation unit |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| output-cases |
output-cases.cwl
(CommandLineTool)
|
Output cases |
|
| unspecified---secondary |
unspecified---secondary.cwl
(CommandLineTool)
|
Identify Unspecified - secondary |
|
| read-potential-cases-fhir |
read-potential-cases-fhir.cwl
(CommandLineTool)
|
Read potential cases from a FHIR server. |
|
| other-or-unspecified-infectious-organisms---secondary |
other-or-unspecified-infectious-organisms---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms - secondary |
|
| acute-other-or-unspecified-infectious-organisms---secondary |
acute-other-or-unspecified-infectious-organisms---secondary.cwl
(CommandLineTool)
|
Identify Acute Other or unspecified infectious organisms - secondary |
|
| lower-other-or-unspecified-infectious-organisms---secondary |
lower-other-or-unspecified-infectious-organisms---secondary.cwl
(CommandLineTool)
|
Identify Lower Other or unspecified infectious organisms - secondary |
|
| other-or-unspecified-infectious-organisms-liver---secondary |
other-or-unspecified-infectious-organisms-liver---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms liver - secondary |
|
| other-or-unspecified-infectious-organisms-media---secondary |
other-or-unspecified-infectious-organisms-media---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms media - secondary |
|
| other-or-unspecified-infectious-organisms-sepsis---secondary |
other-or-unspecified-infectious-organisms-sepsis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms sepsis - secondary |
|
| other-or-unspecified-infectious-organisms-system---secondary |
other-or-unspecified-infectious-organisms-system---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms system - secondary |
|
| other-or-unspecified-infectious-organisms-tissue---secondary |
other-or-unspecified-infectious-organisms-tissue---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms tissue - secondary |
|
| other-or-unspecified-infectious-organisms-externa---secondary |
other-or-unspecified-infectious-organisms-externa---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms externa - secondary |
|
| multiple-other-or-unspecified-infectious-organisms---secondary |
multiple-other-or-unspecified-infectious-organisms---secondary.cwl
(CommandLineTool)
|
Identify Multiple Other or unspecified infectious organisms - secondary |
|
| other-or-unspecified-infectious-organisms-cystitis---secondary |
other-or-unspecified-infectious-organisms-cystitis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms cystitis - secondary |
|
| other-or-unspecified-infectious-organisms-myositis---secondary |
other-or-unspecified-infectious-organisms-myositis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms myositis - secondary |
|
| other-or-unspecified-infectious-organisms-pyoderma---secondary |
other-or-unspecified-infectious-organisms-pyoderma---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms pyoderma - secondary |
|
| other-or-unspecified-infectious-organisms-sequelae---secondary |
other-or-unspecified-infectious-organisms-sequelae---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms sequelae - secondary |
|
| other-or-unspecified-infectious-organisms-granuloma---secondary |
other-or-unspecified-infectious-organisms-granuloma---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms granuloma - secondary |
|
| other-or-unspecified-infectious-organisms-pneumonia---secondary |
other-or-unspecified-infectious-organisms-pneumonia---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms pneumonia - secondary |
|
| parasitic-other-or-unspecified-infectious-organisms---secondary |
parasitic-other-or-unspecified-infectious-organisms---secondary.cwl
(CommandLineTool)
|
Identify Parasitic Other or unspecified infectious organisms - secondary |
|
| pulmonary-other-or-unspecified-infectious-organisms---secondary |
pulmonary-other-or-unspecified-infectious-organisms---secondary.cwl
(CommandLineTool)
|
Identify Pulmonary Other or unspecified infectious organisms - secondary |
|
| congenital-other-or-unspecified-infectious-organisms---secondary |
congenital-other-or-unspecified-infectious-organisms---secondary.cwl
(CommandLineTool)
|
Identify Congenital Other or unspecified infectious organisms - secondary |
|
| other-or-unspecified-infectious-organisms-bronchitis---secondary |
other-or-unspecified-infectious-organisms-bronchitis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms bronchitis - secondary |
|
| other-or-unspecified-infectious-organisms-myringitis---secondary |
other-or-unspecified-infectious-organisms-myringitis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms myringitis - secondary |
|
| arthropathy-other-or-unspecified-infectious-organisms---secondary |
arthropathy-other-or-unspecified-infectious-organisms---secondary.cwl
(CommandLineTool)
|
Identify Arthropathy Other or unspecified infectious organisms - secondary |
|
| intraspinal-other-or-unspecified-infectious-organisms---secondary |
intraspinal-other-or-unspecified-infectious-organisms---secondary.cwl
(CommandLineTool)
|
Identify Intraspinal Other or unspecified infectious organisms - secondary |
|
| other-or-unspecified-infectious-organisms-mastoiditis---secondary |
other-or-unspecified-infectious-organisms-mastoiditis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms mastoiditis - secondary |
|
| other-or-unspecified-infectious-organisms-myocarditis---secondary |
other-or-unspecified-infectious-organisms-myocarditis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms myocarditis - secondary |
|
| other-or-unspecified-infectious-organisms-pharyngitis---secondary |
other-or-unspecified-infectious-organisms-pharyngitis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms pharyngitis - secondary |
|
| other-or-unspecified-infectious-organisms-tonsillitis---secondary |
other-or-unspecified-infectious-organisms-tonsillitis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms tonsillitis - secondary |
|
| other-or-unspecified-infectious-organisms-transmitted---secondary |
other-or-unspecified-infectious-organisms-transmitted---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms transmitted - secondary |
|
| other-or-unspecified-infectious-organisms-pericarditis---secondary |
other-or-unspecified-infectious-organisms-pericarditis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms pericarditis - secondary |
|
| spondylopathy-other-or-unspecified-infectious-organisms---secondary |
spondylopathy-other-or-unspecified-infectious-organisms---secondary.cwl
(CommandLineTool)
|
Identify Spondylopathy Other or unspecified infectious organisms - secondary |
|
| other-or-unspecified-infectious-organisms-conjunctivitis---secondary |
other-or-unspecified-infectious-organisms-conjunctivitis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms conjunctivitis - secondary |
|
| other-or-unspecified-infectious-organisms-balanoposthitis---secondary |
other-or-unspecified-infectious-organisms-balanoposthitis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms balanoposthitis - secondary |
|
| other-or-unspecified-infectious-organisms-creutzfeldtjakob---secondary |
other-or-unspecified-infectious-organisms-creutzfeldtjakob---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms creutzfeldtjakob - secondary |
|
| other-or-unspecified-infectious-organisms-encephalomyelitis---secondary |
other-or-unspecified-infectious-organisms-encephalomyelitis---secondary.cwl
(CommandLineTool)
|
Identify Other or unspecified infectious organisms encephalomyelitis - secondary |
|
| tubulointerstitial-other-or-unspecified-infectious-organisms---secondary |
tubulointerstitial-other-or-unspecified-infectious-organisms---secondary.cwl
(CommandLineTool)
|
Identify Tubulointerstitial Other or unspecified infectious organisms - secondary |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| cases | File |
https://w3id.org/cwl/view/git/c41412a5b80d6fae037690859a1b5ca7c141bc8f/Other-or-unspecified-infectious-organisms.cwl
