Disease:

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Fetched 2026-03-14 23:08:33 GMT
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Workflow as SVG
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  • Default Values
  • Nested Workflows
  • Tools
  • Inputs/Outputs

Inputs

ID Type Title Doc
inputModule1 File

Js implementation unit
inputModule2 File

Python implementation unit
inputModule3 File

Python implementation unit
inputModule4 File

Python implementation unit
inputModule5 File

Python implementation unit
inputModule6 File

Python implementation unit
inputModule7 File

Python implementation unit
inputModule8 File

Python implementation unit
inputModule9 File

Python implementation unit
inputModule10 File

Python implementation unit
inputModule11 File

Python implementation unit
inputModule12 File

Python implementation unit
inputModule13 File

Python implementation unit
inputModule14 File

Python implementation unit
inputModule15 File

Python implementation unit
inputModule16 File

Python implementation unit
inputModule17 File

Python implementation unit
inputModule18 File

Python implementation unit

Steps

ID Runs Label Doc
output-cases
output-cases.cwl (CommandLineTool)

Output cases
read-potential-cases-fhir
read-potential-cases-fhir.cwl (CommandLineTool)

Read potential cases from a FHIR server.
acute-covid-19-infection---primary
acute-covid-19-infection---primary.cwl (CommandLineTool)

Identify Acute COVID-19 infection - primary
covid-19-infection-assay---primary
covid-19-infection-assay---primary.cwl (CommandLineTool)

Identify COVID-19 infection assay - primary
covid-19-infection-scale---primary
covid-19-infection-scale---primary.cwl (CommandLineTool)

Identify COVID-19 infection scale - primary
covid-19-infection-serum---primary
covid-19-infection-serum---primary.cwl (CommandLineTool)

Identify COVID-19 infection serum - primary
covid-19-infection-antigen---primary
covid-19-infection-antigen---primary.cwl (CommandLineTool)

Identify COVID-19 infection antigen - primary
covid-19-infection-antibody---primary
covid-19-infection-antibody---primary.cwl (CommandLineTool)

Identify COVID-19 infection antibody - primary
covid-19-infection-detected---primary
covid-19-infection-detected---primary.cwl (CommandLineTool)

Identify COVID-19 infection detected - primary
covid-19-infection-severity---primary
covid-19-infection-severity---primary.cwl (CommandLineTool)

Identify COVID-19 infection severity - primary
covid-19-infection-speciman---primary
covid-19-infection-speciman---primary.cwl (CommandLineTool)

Identify COVID-19 infection speciman - primary
positive-covid-19-infection---primary
positive-covid-19-infection---primary.cwl (CommandLineTool)

Identify Positive COVID-19 infection - primary
covid-19-infection-confirmed---primary
covid-19-infection-confirmed---primary.cwl (CommandLineTool)

Identify COVID-19 infection confirmed - primary
covid-19-infection-detection---primary
covid-19-infection-detection---primary.cwl (CommandLineTool)

Identify COVID-19 infection detection - primary
covid-19-infection-reference---primary
covid-19-infection-reference---primary.cwl (CommandLineTool)

Identify COVID-19 infection reference - primary
covid-19-infection-identified---primary
covid-19-infection-identified---primary.cwl (CommandLineTool)

Identify COVID-19 infection identified - primary
covid-19-infection-coronavirus---primary
covid-19-infection-coronavirus---primary.cwl (CommandLineTool)

Identify COVID-19 infection coronavirus - primary
ribonucleic-covid-19-infection---primary
ribonucleic-covid-19-infection---primary.cwl (CommandLineTool)

Identify Ribonucleic COVID-19 infection - primary

Outputs

ID Type Label Doc
cases File
html json turtle jsonld rdfxml svg png dot zip ro yaml raw
Permalink: https://w3id.org/cwl/view/git/d580d9297b442de1505de17968212c2a41cc3722/COVID-19-infection.cwl