caliber
InputPotential cases of Bacterial-sepsis-of-newborn
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Step

load
'read-potential-cases-disc'
Read potential cases from disc
Select implementation:
Switch to: read-potential-cases-i2b2, read-potential-cases-omop, read-potential-cases-fhir.
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OutputInitial potential cases, read from disc. (csv)
InputPotential cases of Bacterial-sepsis-of-newborn
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Step

logic
'fetal-bacterial-sepsis-of-newborn---primary'
Identify Fetal Bacterial sepsis of newborn - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Bacterial-sepsis-of-newborn related events in electronic health record. (csv)
InputPotential cases of Bacterial-sepsis-of-newborn
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Step

logic
'bacterial-sepsis-of-newborn-streptococci---primary'
Identify Bacterial sepsis of newborn streptococci - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Bacterial-sepsis-of-newborn related events in electronic health record. (csv)
InputPotential cases of Bacterial-sepsis-of-newborn
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Step

logic
'congenital-bacterial-sepsis-of-newborn---primary'
Identify Congenital Bacterial sepsis of newborn - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Bacterial-sepsis-of-newborn related events in electronic health record. (csv)
InputPotential cases of Bacterial-sepsis-of-newborn
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Step

logic
'bacterial-sepsis-of-newborn-staphylococcu---primary'
Identify Bacterial sepsis of newborn staphylococcu - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Bacterial-sepsis-of-newborn related events in electronic health record. (csv)
InputPotential cases of Bacterial-sepsis-of-newborn
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Step

logic
'bacterial-sepsis-of-newborn---primary'
Identify Bacterial sepsis of newborn - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Bacterial-sepsis-of-newborn related events in electronic health record. (csv)
InputPotential cases of Bacterial-sepsis-of-newborn
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Step

logic
'other-bacterial-sepsis-of-newborn---primary'
Identify Other Bacterial sepsis of newborn - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Bacterial-sepsis-of-newborn related events in electronic health record. (csv)
InputPotential cases of Bacterial-sepsis-of-newborn
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Step

logic
'bacterial-sepsis-of-newborn-specified---primary'
Identify Bacterial sepsis of newborn specified - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Bacterial-sepsis-of-newborn related events in electronic health record. (csv)
InputPotential cases of Bacterial-sepsis-of-newborn
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Step

logic
'bacterial-sepsis-of-newborn-septicaemia---primary'
Identify Bacterial sepsis of newborn septicaemia - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Bacterial-sepsis-of-newborn related events in electronic health record. (csv)
InputPotential cases of Bacterial-sepsis-of-newborn
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Step

logic
'perinatal-bacterial-sepsis-of-newborn---primary'
Identify Perinatal Bacterial sepsis of newborn - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Bacterial-sepsis-of-newborn related events in electronic health record. (csv)
InputPotential cases of Bacterial-sepsis-of-newborn
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Step

logic
'bacterial-sepsis-bacterial-sepsis-of-newborn-newborn---secondary'
Identify Bacterial sepsis Bacterial sepsis of newborn newborn - secondary
Select implementation:
⇣
OutputPatients with clinical codes indicating Bacterial-sepsis-of-newborn related events in electronic health record. (csv)
InputPotential cases of Bacterial-sepsis-of-newborn
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Step

output
'output-cases'
Output cases
Select implementation:
⇣
OutputOutput containing patients flagged as having this type of Bacterial-sepsis-of-newborn (csv)