caliber
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

load
'read-potential-cases-disc'
Read potential cases from disc
Select implementation:
OutputInitial potential cases, read from disc. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms---secondary'
Identify Other or unspecified infectious organisms - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-sepsis---secondary'
Identify Other or unspecified infectious organisms sepsis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-transmitted---secondary'
Identify Other or unspecified infectious organisms transmitted - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-creutzfeldt-jakob---secondary'
Identify Other or unspecified infectious organisms creutzfeldt-jakob - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-system---secondary'
Identify Other or unspecified infectious organisms system - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-sequelae---secondary'
Identify Other or unspecified infectious organisms sequelae - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'unspecified---secondary'
Identify Unspecified - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'parasitic-other-or-unspecified-infectious-organisms---secondary'
Identify Parasitic Other or unspecified infectious organisms - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-encephalomyelitis---secondary'
Identify Other or unspecified infectious organisms encephalomyelitis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-granuloma---secondary'
Identify Other or unspecified infectious organisms granuloma - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'intraspinal-other-or-unspecified-infectious-organisms---secondary'
Identify Intraspinal Other or unspecified infectious organisms - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'multiple-other-or-unspecified-infectious-organisms---secondary'
Identify Multiple Other or unspecified infectious organisms - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-conjunctivitis---secondary'
Identify Other or unspecified infectious organisms conjunctivitis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-externa---secondary'
Identify Other or unspecified infectious organisms externa - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-media---secondary'
Identify Other or unspecified infectious organisms media - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-mastoiditis---secondary'
Identify Other or unspecified infectious organisms mastoiditis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-myringitis---secondary'
Identify Other or unspecified infectious organisms myringitis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-pericarditis---secondary'
Identify Other or unspecified infectious organisms pericarditis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'acute-other-or-unspecified-infectious-organisms---secondary'
Identify Acute Other or unspecified infectious organisms - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-myocarditis---secondary'
Identify Other or unspecified infectious organisms myocarditis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-pharyngitis---secondary'
Identify Other or unspecified infectious organisms pharyngitis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-laryngitis---secondary'
Identify Other or unspecified infectious organisms laryngitis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-tonsillitis---secondary'
Identify Other or unspecified infectious organisms tonsillitis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-pneumonia---secondary'
Identify Other or unspecified infectious organisms pneumonia - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-bronchitis---secondary'
Identify Other or unspecified infectious organisms bronchitis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'lower-other-or-unspecified-infectious-organisms---secondary'
Identify Lower Other or unspecified infectious organisms - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'pulmonary-other-or-unspecified-infectious-organisms---secondary'
Identify Pulmonary Other or unspecified infectious organisms - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-liver---secondary'
Identify Other or unspecified infectious organisms liver - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-pyoderma---secondary'
Identify Other or unspecified infectious organisms pyoderma - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-tissue---secondary'
Identify Other or unspecified infectious organisms tissue - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'arthropathy-other-or-unspecified-infectious-organisms---secondary'
Identify Arthropathy Other or unspecified infectious organisms - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'spondylopathy-other-or-unspecified-infectious-organisms---secondary'
Identify Spondylopathy Other or unspecified infectious organisms - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-myositis---secondary'
Identify Other or unspecified infectious organisms myositis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'tubulointerstitial-other-or-unspecified-infectious-organisms---secondary'
Identify Tubulointerstitial Other or unspecified infectious organisms - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-cystitis---secondary'
Identify Other or unspecified infectious organisms cystitis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'other-or-unspecified-infectious-organisms-balanoposthitis---secondary'
Identify Other or unspecified infectious organisms balanoposthitis - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

logic
'congenital-other-or-unspecified-infectious-organisms---secondary'
Identify Congenital Other or unspecified infectious organisms - secondary
Select implementation:
OutputPatients with clinical codes indicating Other-or-unspecified-infectious-organisms related events in electronic health record. (csv)
InputPotential cases of Other-or-unspecified-infectious-organisms
Step

output
'output-cases'
Output cases
Select implementation:
OutputOutput containing patients flagged as having this type of Other-or-unspecified-infectious-organisms (csv)