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© kclhi 2020
'Alcoholic-liver-disease' phenotype
Dx2rRinjMdDgRFjZEJYUh7 - Alcoholic liver disease
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caliber
Input
Potential cases of Alcoholic-liver-disease
⇣
Step
load
'read-potential-cases-disc'
Read potential cases from disc
Select implementation:
python
js
VIEW
Switch to:
read-potential-cases-i2b2
,
read-potential-cases-omop
,
read-potential-cases-fhir
.
⇣
Output
Initial potential cases, read from disc. (csv)
Input
Potential cases of Alcoholic-liver-disease
⇣
Step
logic
'alcoholic-liver-disease-cirrhosis---primary'
Identify Alcoholic liver disease cirrhosis - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Alcoholic-liver-disease related events in electronic health record. (csv)
Input
Potential cases of Alcoholic-liver-disease
⇣
Step
logic
'alcoholic-liver-disease---primary'
Identify Alcoholic liver disease - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Alcoholic-liver-disease related events in electronic health record. (csv)
Input
Potential cases of Alcoholic-liver-disease
⇣
Step
logic
'alcoholic-liver-disease-hepatitis---primary'
Identify Alcoholic liver disease hepatitis - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Alcoholic-liver-disease related events in electronic health record. (csv)
Input
Potential cases of Alcoholic-liver-disease
⇣
Step
logic
'alcoholic-liver---secondary'
Identify Alcoholic Liver - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Alcoholic-liver-disease related events in electronic health record. (csv)
Input
Potential cases of Alcoholic-liver-disease
⇣
Step
output
'output-cases'
Output cases
Select implementation:
python
VIEW
⇣
Output
Output containing patients flagged as having this type of Alcoholic-liver-disease (csv)