caliber
InputPotential cases of Pneumonia
Step

load
'read-potential-cases-disc'
Read potential cases from disc
Select implementation:
OutputInitial potential cases, read from disc. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-identified---secondary'
Identify Pneumonia identified - secondary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-classified---secondary'
Identify Pneumonia classified - secondary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia---secondary'
Identify Pneumonia - secondary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-influenza---secondary'
Identify Pneumonia influenza - secondary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-organism---secondary'
Identify Pneumonia organism - secondary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-chapter---primary'
Identify Pneumonia chapter - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-chaptr---primary'
Identify Pneumonia chaptr - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-bacteria---primary'
Identify Pneumonia bacteria - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'bronchopneumonia---primary'
Identify Bronchopneumonia - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-basal---primary'
Identify Pneumonia basal - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'bilateral-pneumonia---primary'
Identify Bilateral Pneumonia - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-influenzae---primary'
Identify Pneumonia influenzae - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-community---primary'
Identify Pneumonia community - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'hospital-pneumonia---primary'
Identify Hospital Pneumonia - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'lower-pneumonia---primary'
Identify Lower Pneumonia - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'upper-pneumonia---primary'
Identify Upper Pneumonia - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-lobar---primary'
Identify Pneumonia lobar - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia---primary'
Identify Pneumonia - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-measles---primary'
Identify Pneumonia measles - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-mycoplasma---primary'
Identify Pneumonia mycoplasma - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-virus---primary'
Identify Pneumonia virus - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-klebsiella---primary'
Identify Pneumonia klebsiella - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-streptococcu---primary'
Identify Pneumonia streptococcu - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-varicella---primary'
Identify Pneumonia varicella - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-cough---primary'
Identify Pneumonia cough - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-pneumonitis---primary'
Identify Pneumonia pneumonitis - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'right-pneumonia---primary'
Identify Right Pneumonia - primary
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'viral-pneumonia---uk-biobank'
Identify Viral Pneumonia - UK Biobank
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-streptococcu---uk-biobank'
Identify Pneumonia streptococcu - UK Biobank
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-influenzae---uk-biobank'
Identify Pneumonia influenzae - UK Biobank
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'bacterial-pneumonia---uk-biobank'
Identify Bacterial Pneumonia - UK Biobank
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'infectious-pneumonia---uk-biobank'
Identify Infectious Pneumonia - UK Biobank
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-report---uk-biobank'
Identify Pneumonia report - UK Biobank
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

logic
'pneumonia-unspecified---uk-biobank'
Identify Pneumonia unspecified - UK Biobank
Select implementation:
OutputPatients with clinical codes indicating Pneumonia related events in electronic health record. (csv)
InputPotential cases of Pneumonia
Step

output
'output-cases'
Output cases
Select implementation:
OutputOutput containing patients flagged as having this type of Pneumonia (csv)