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© kclhi 2020
'Diaphragmatic-hernia' phenotype
j3Ab5ehw85BhFA83WvmJAA - Diaphragmatic hernia
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caliber
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
load
'read-potential-cases-disc'
Read potential cases from disc
Select implementation:
python
js
VIEW
Switch to:
read-potential-cases-i2b2
,
read-potential-cases-omop
,
read-potential-cases-fhir
.
⇣
Output
Initial potential cases, read from disc. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
logic
'oesophageal-diaphragmatic-hernia---primary'
Identify Oesophageal Diaphragmatic hernia - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Diaphragmatic-hernia related events in electronic health record. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
logic
'diaphragmatic-hernia-approach---primary'
Identify Diaphragmatic hernia approach - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Diaphragmatic-hernia related events in electronic health record. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
logic
'diaphragmatic-hernia-repair---primary'
Identify Diaphragmatic hernia repair - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Diaphragmatic-hernia related events in electronic health record. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
logic
'diaphragmatic-hernia-gangrene---primary'
Identify Diaphragmatic hernia gangrene - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Diaphragmatic-hernia related events in electronic health record. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
logic
'diaphragmatic-hernia-obstruction---primary'
Identify Diaphragmatic hernia obstruction - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Diaphragmatic-hernia related events in electronic health record. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
logic
'irreducible-diaphragmatic-hernia---primary'
Identify Irreducible Diaphragmatic hernia - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Diaphragmatic-hernia related events in electronic health record. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
logic
'simple-diaphragmatic-hernia---primary'
Identify Simple Diaphragmatic hernia - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Diaphragmatic-hernia related events in electronic health record. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
logic
'diaphragmatic-hernia-hiatus---primary'
Identify Diaphragmatic hernia hiatus - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Diaphragmatic-hernia related events in electronic health record. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
logic
'hernia---primary'
Identify Hernia - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Diaphragmatic-hernia related events in electronic health record. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
logic
'diaphragmatic-hernia---primary'
Identify Diaphragmatic hernia - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Diaphragmatic-hernia related events in electronic health record. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
logic
'diaphragmatic-hernia---secondary'
Identify Diaphragmatic Hernia - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Diaphragmatic-hernia related events in electronic health record. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
logic
'procedure-for-diaphragmatic-hernia---secondary'
Identify Procedure for Diaphragmatic hernia - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Diaphragmatic-hernia related events in electronic health record. (csv)
Input
Potential cases of Diaphragmatic-hernia
⇣
Step
output
'output-cases'
Output cases
Select implementation:
python
VIEW
⇣
Output
Output containing patients flagged as having this type of Diaphragmatic-hernia (csv)