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© kclhi 2020
'Bronchiestasis' phenotype
ZckoXfUWNXn8Jn7fdLQuxj - Bronchiestasis
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caliber
Input
Potential cases of Bronchiestasis
⇣
Step
load
'read-potential-cases-disc'
Read potential cases from disc
Select implementation:
python
js
VIEW
Switch to:
read-potential-cases-i2b2
,
read-potential-cases-omop
,
read-potential-cases-fhir
.
⇣
Output
Initial potential cases, read from disc. (csv)
Input
Potential cases of Bronchiestasis
⇣
Step
logic
'bronchiestasis-bronchiectasis---secondary'
Identify Bronchiestasis bronchiectasis - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Bronchiestasis related events in electronic health record. (csv)
Input
Potential cases of Bronchiestasis
⇣
Step
logic
'bronchiestasis-bronchiectasis---primary'
Identify Bronchiestasis bronchiectasis - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Bronchiestasis related events in electronic health record. (csv)
Input
Potential cases of Bronchiestasis
⇣
Step
logic
'bronchiestasis-doctor---uk-biobank'
Identify Bronchiestasis doctor - UK Biobank
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Bronchiestasis related events in electronic health record. (csv)
Input
Potential cases of Bronchiestasis
⇣
Step
logic
'bronchiestasis---uk-biobank'
Identify Bronchiestasis - UK Biobank
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Bronchiestasis related events in electronic health record. (csv)
Input
Potential cases of Bronchiestasis
⇣
Step
logic
'bronchiestasis-bronchiectasis---uk-biobank'
Identify Bronchiestasis bronchiectasis - UK Biobank
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Bronchiestasis related events in electronic health record. (csv)
Input
Potential cases of Bronchiestasis
⇣
Step
output
'output-cases'
Output cases
Select implementation:
python
VIEW
⇣
Output
Output containing patients flagged as having this type of Bronchiestasis (csv)