caliber
InputPotential cases of Bronchiestasis
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Step

load
'read-potential-cases-disc'
Read potential cases from disc
Select implementation:
Switch to: read-potential-cases-i2b2, read-potential-cases-omop, read-potential-cases-fhir.
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OutputInitial potential cases, read from disc. (csv)
InputPotential cases of Bronchiestasis
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Step

logic
'bronchiestasis-bronchiectasis---secondary'
Identify Bronchiestasis bronchiectasis - secondary
Select implementation:
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OutputPatients with clinical codes indicating Bronchiestasis related events in electronic health record. (csv)
InputPotential cases of Bronchiestasis
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Step

logic
'bronchiestasis-bronchiectasis---primary'
Identify Bronchiestasis bronchiectasis - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Bronchiestasis related events in electronic health record. (csv)
InputPotential cases of Bronchiestasis
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Step

logic
'bronchiestasis-doctor---uk-biobank'
Identify Bronchiestasis doctor - UK Biobank
Select implementation:
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OutputPatients with clinical codes indicating Bronchiestasis related events in electronic health record. (csv)
InputPotential cases of Bronchiestasis
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Step

logic
'bronchiestasis---uk-biobank'
Identify Bronchiestasis - UK Biobank
Select implementation:
⇣
OutputPatients with clinical codes indicating Bronchiestasis related events in electronic health record. (csv)
InputPotential cases of Bronchiestasis
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Step

logic
'bronchiestasis-bronchiectasis---uk-biobank'
Identify Bronchiestasis bronchiectasis - UK Biobank
Select implementation:
⇣
OutputPatients with clinical codes indicating Bronchiestasis related events in electronic health record. (csv)
InputPotential cases of Bronchiestasis
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Step

output
'output-cases'
Output cases
Select implementation:
⇣
OutputOutput containing patients flagged as having this type of Bronchiestasis (csv)