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© kclhi 2020
'Epilepsy' phenotype
Wg2UM5mf2UnhQ57yA44GZL - Epilepsy
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caliber
Input
Potential cases of Epilepsy
⇣
Step
load
'read-potential-cases-disc'
Read potential cases from disc
Select implementation:
python
js
VIEW
Switch to:
read-potential-cases-i2b2
,
read-potential-cases-omop
,
read-potential-cases-fhir
.
⇣
Output
Initial potential cases, read from disc. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy---primary'
Identify Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-epilepticu---primary'
Identify Epilepsy epilepticu - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-resolved---primary'
Identify Epilepsy resolved - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'patient-epilepsy---primary'
Identify Patient Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-monitoring---primary'
Identify Epilepsy monitoring - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-effects---primary'
Identify Epilepsy effects - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-treatment---primary'
Identify Epilepsy treatment - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-control---primary'
Identify Epilepsy control - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-month---primary'
Identify Epilepsy month - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-employment---primary'
Identify Epilepsy employment - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-impairment---primary'
Identify Epilepsy impairment - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-activity---primary'
Identify Epilepsy activity - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-seizure---primary'
Identify Epilepsy seizure - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-invite---primary'
Identify Epilepsy invite - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-letter---primary'
Identify Epilepsy letter - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-psychosis---primary'
Identify Epilepsy psychosis - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'limbic-epilepsy---primary'
Identify Limbic Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'myoclonic-epilepsy---primary'
Identify Myoclonic Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'encephalopathy-epilepsy---primary'
Identify Encephalopathy Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-petit---primary'
Identify Epilepsy petit - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-absence---primary'
Identify Epilepsy absence - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'pykno-epilepsy---primary'
Identify Pykno-epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'juvenile-epilepsy---primary'
Identify Juvenile Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-lennox-gastaut---primary'
Identify Epilepsy lennox-gastaut - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'convulsive-epilepsy---primary'
Identify Convulsive Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-unspecified---primary'
Identify Epilepsy unspecified - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'grand-epilepsy---primary'
Identify Grand Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'tonicclonic-epilepsy---primary'
Identify Tonicclonic Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-otohara---primary'
Identify Epilepsy otohara - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-motor---primary'
Identify Epilepsy motor - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'complex-epilepsy---primary'
Identify Complex Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-consciousness---primary'
Identify Epilepsy consciousness - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'focal-epilepsy---primary'
Identify Focal Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-reflex---primary'
Identify Epilepsy reflex - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'partial-epilepsy---primary'
Identify Partial Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-hypsarrhythmia---primary'
Identify Epilepsy hypsarrhythmia - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-infantile---primary'
Identify Epilepsy infantile - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-spasm---primary'
Identify Epilepsy spasm - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-west---primary'
Identify Epilepsy west - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-ohtahara---primary'
Identify Epilepsy ohtahara - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-dravet---primary'
Identify Epilepsy dravet - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-panayiotopoulos---primary'
Identify Epilepsy panayiotopoulos - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy-forms---primary'
Identify Epilepsy forms - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'other-epilepsy---primary'
Identify Other Epilepsy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
logic
'epilepsy---secondary'
Identify Epilepsy - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Epilepsy related events in electronic health record. (csv)
Input
Potential cases of Epilepsy
⇣
Step
output
'output-cases'
Output cases
Select implementation:
python
VIEW
⇣
Output
Output containing patients flagged as having this type of Epilepsy (csv)