caliber
InputPotential cases of Endometriosis
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Step

load
'read-potential-cases-disc'
Read potential cases from disc
Select implementation:
Switch to: read-potential-cases-i2b2, read-potential-cases-omop, read-potential-cases-fhir.
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OutputInitial potential cases, read from disc. (csv)
InputPotential cases of Endometriosis
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Step

logic
'endometriosis---primary'
Identify Endometriosis - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Endometriosis related events in electronic health record. (csv)
InputPotential cases of Endometriosis
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Step

logic
'endometriosis-adenomyosis---primary'
Identify Endometriosis adenomyosis - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Endometriosis related events in electronic health record. (csv)
InputPotential cases of Endometriosis
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Step

logic
'endometriosis-uterus---primary'
Identify Endometriosis uterus - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Endometriosis related events in electronic health record. (csv)
InputPotential cases of Endometriosis
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Step

logic
'endometriosis-ovary---primary'
Identify Endometriosis ovary - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Endometriosis related events in electronic health record. (csv)
InputPotential cases of Endometriosis
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Step

logic
'other-endometriosis---primary'
Identify Other Endometriosis - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Endometriosis related events in electronic health record. (csv)
InputPotential cases of Endometriosis
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Step

logic
'endometriosis-ligament---primary'
Identify Endometriosis ligament - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Endometriosis related events in electronic health record. (csv)
InputPotential cases of Endometriosis
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Step

logic
'endometriosis-peritoneum---primary'
Identify Endometriosis peritoneum - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Endometriosis related events in electronic health record. (csv)
InputPotential cases of Endometriosis
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Step

logic
'endometriosis-intestine---primary'
Identify Endometriosis intestine - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Endometriosis related events in electronic health record. (csv)
InputPotential cases of Endometriosis
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Step

logic
'endometriosis---secondary'
Identify Endometriosis - secondary
Select implementation:
⇣
OutputPatients with clinical codes indicating Endometriosis related events in electronic health record. (csv)
InputPotential cases of Endometriosis
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Step

output
'output-cases'
Output cases
Select implementation:
⇣
OutputOutput containing patients flagged as having this type of Endometriosis (csv)