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© kclhi 2020
'Dysmenorrhoea' phenotype
Ypx3HMzkeY6ye8h7fura54 - Dysmenorrhoea
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caliber
Input
Potential cases of Dysmenorrhoea
⇣
Step
external
'read-potential-cases-i2b2'
Read potential cases from i2b2
Select implementation:
js
VIEW
Switch to:
read-potential-cases-disc
,
read-potential-cases-omop
,
read-potential-cases-fhir
.
⇣
Output
Initial potential cases, read from i2b2. (csv)
Input
Potential cases of Dysmenorrhoea
⇣
Step
logic
'dysmenorrhoea---primary'
Identify Dysmenorrhoea - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Dysmenorrhoea related events in electronic health record. (csv)
Input
Potential cases of Dysmenorrhoea
⇣
Step
logic
'dysmenorrhoea-period---primary'
Identify Dysmenorrhoea period - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Dysmenorrhoea related events in electronic health record. (csv)
Input
Potential cases of Dysmenorrhoea
⇣
Step
logic
'painful-dysmenorrhoea---primary'
Identify Painful Dysmenorrhoea - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Dysmenorrhoea related events in electronic health record. (csv)
Input
Potential cases of Dysmenorrhoea
⇣
Step
logic
'dysmenorrhoea---secondary'
Identify Dysmenorrhoea - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Dysmenorrhoea related events in electronic health record. (csv)
Input
Potential cases of Dysmenorrhoea
⇣
Step
output
'output-cases'
Output cases
Select implementation:
python
VIEW
⇣
Output
Output containing patients flagged as having this type of Dysmenorrhoea (csv)