caliber
InputPotential cases of Crohns-disease
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Step

load
'read-potential-cases-disc'
Read potential cases from disc
Select implementation:
Switch to: read-potential-cases-i2b2, read-potential-cases-omop, read-potential-cases-fhir.
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OutputInitial potential cases, read from disc. (csv)
InputPotential cases of Crohns-disease
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Step

logic
'crohns-disease---primary'
Identify Crohns disease - primary
Select implementation:
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OutputPatients with clinical codes indicating Crohns-disease related events in electronic health record. (csv)
InputPotential cases of Crohns-disease
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Step

logic
'crohns-disease-enteritis---primary'
Identify Crohns disease enteritis - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Crohns-disease related events in electronic health record. (csv)
InputPotential cases of Crohns-disease
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Step

logic
'crohns-disease-ileum---primary'
Identify Crohns disease ileum - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Crohns-disease related events in electronic health record. (csv)
InputPotential cases of Crohns-disease
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Step

logic
'crohns-disease-intestine---primary'
Identify Crohns disease intestine - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Crohns-disease related events in electronic health record. (csv)
InputPotential cases of Crohns-disease
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Step

logic
'small-crohns-disease---primary'
Identify Small Crohns disease - primary
Select implementation:
⇣
OutputPatients with clinical codes indicating Crohns-disease related events in electronic health record. (csv)
InputPotential cases of Crohns-disease
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Step

logic
'large-crohns-disease---primary'
Identify Large Crohns disease - primary
Select implementation:
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OutputPatients with clinical codes indicating Crohns-disease related events in electronic health record. (csv)
InputPotential cases of Crohns-disease
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Step

logic
'regional-crohns-disease---primary'
Identify Regional Crohns disease - primary
Select implementation:
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OutputPatients with clinical codes indicating Crohns-disease related events in electronic health record. (csv)
InputPotential cases of Crohns-disease
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Step

logic
'crohn's---primary'
Identify Crohn's - primary
Select implementation:
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OutputPatients with clinical codes indicating Crohns-disease related events in electronic health record. (csv)
InputPotential cases of Crohns-disease
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Step

logic
'crohns-disease-index---primary'
Identify Crohns disease index - primary
Select implementation:
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OutputPatients with clinical codes indicating Crohns-disease related events in electronic health record. (csv)
InputPotential cases of Crohns-disease
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Step

logic
'crohn's-[regional-enteritis]-crohns-disease---secondary'
Identify Crohn's [regional enteritis] Crohns disease - secondary
Select implementation:
⇣
OutputPatients with clinical codes indicating Crohns-disease related events in electronic health record. (csv)
InputPotential cases of Crohns-disease
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Step

output
'output-cases'
Output cases
Select implementation:
⇣
OutputOutput containing patients flagged as having this type of Crohns-disease (csv)