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© kclhi 2020
'Cataract' phenotype
YfnhFx9TGYNQZHbcrYXvvQ - Cataract
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caliber
Input
Potential cases of Cataract
⇣
Step
load
'read-potential-cases-disc'
Read potential cases from disc
Select implementation:
python
js
VIEW
Switch to:
read-potential-cases-i2b2
,
read-potential-cases-omop
,
read-potential-cases-fhir
.
⇣
Output
Initial potential cases, read from disc. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract---primary'
Identify Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-extraction---primary'
Identify Cataract extraction - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'bilateral-cataract---primary'
Identify Bilateral Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-present---primary'
Identify Cataract present - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'capsular-cataract---primary'
Identify Capsular Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'ocular-cataract---primary'
Identify Ocular Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'referral-cataract---primary'
Identify Referral Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'dependent-cataract---primary'
Identify Dependent Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-mellitus---primary'
Identify Cataract mellitus - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-specified---primary'
Identify Cataract specified - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-anterior---primary'
Identify Cataract anterior - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cortical-cataract---primary'
Identify Cortical Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'zonular-cataract---primary'
Identify Zonular Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-nuclear---primary'
Identify Cataract nuclear - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-presenile---primary'
Identify Cataract presenile - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-combined---primary'
Identify Cataract combined - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-nonsenile---primary'
Identify Cataract nonsenile - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-capsule---primary'
Identify Cataract capsule - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-immature---primary'
Identify Cataract immature - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'diabetic-cataract---primary'
Identify Diabetic Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'other-cataract---primary'
Identify Other Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-vision---primary'
Identify Cataract vision - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'keratopathy-cataract---primary'
Identify Keratopathy Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-surgery---primary'
Identify Cataract surgery - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'total-cataract---primary'
Identify Total Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-anomaly---primary'
Identify Cataract anomaly - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'congenital-cataract---primary'
Identify Congenital Cataract - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract-following---primary'
Identify Cataract following - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'cataract---secondary'
Identify Cataract - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'after-cataract---secondary'
Identify After-cataract - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'other-cataract---secondary'
Identify Other Cataract - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
logic
'procedure-for-cataract---secondary'
Identify Procedure for Cataract - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Cataract related events in electronic health record. (csv)
Input
Potential cases of Cataract
⇣
Step
output
'output-cases'
Output cases
Select implementation:
python
VIEW
⇣
Output
Output containing patients flagged as having this type of Cataract (csv)