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© kclhi 2020
'Carpal-tunnel-syndrome' phenotype
S8MwPhLwnKqmfwy6XzHtsz - Carpal tunnel syndrome
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caliber
Input
Potential cases of Carpal-tunnel-syndrome
⇣
Step
external
'read-potential-cases-i2b2'
Read potential cases from i2b2
Select implementation:
js
VIEW
Switch to:
read-potential-cases-disc
,
read-potential-cases-omop
,
read-potential-cases-fhir
.
⇣
Output
Initial potential cases, read from i2b2. (csv)
Input
Potential cases of Carpal-tunnel-syndrome
⇣
Step
logic
'carpal-tunnel-syndrome-release---primary'
Identify Carpal tunnel syndrome release - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Carpal-tunnel-syndrome related events in electronic health record. (csv)
Input
Potential cases of Carpal-tunnel-syndrome
⇣
Step
logic
'carpal-tunnel-syndrome---primary'
Identify Carpal tunnel syndrome - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Carpal-tunnel-syndrome related events in electronic health record. (csv)
Input
Potential cases of Carpal-tunnel-syndrome
⇣
Step
logic
'carpal-tunnel-syndrome-injection---primary'
Identify Carpal tunnel syndrome injection - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Carpal-tunnel-syndrome related events in electronic health record. (csv)
Input
Potential cases of Carpal-tunnel-syndrome
⇣
Step
logic
'carpal---primary'
Identify Carpal - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Carpal-tunnel-syndrome related events in electronic health record. (csv)
Input
Potential cases of Carpal-tunnel-syndrome
⇣
Step
logic
'tunnel-carpal---secondary'
Identify Tunnel carpal - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Carpal-tunnel-syndrome related events in electronic health record. (csv)
Input
Potential cases of Carpal-tunnel-syndrome
⇣
Step
logic
'procedure-for-carpal-tunnel-syndrome---secondary'
Identify Procedure for Carpal tunnel syndrome - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Carpal-tunnel-syndrome related events in electronic health record. (csv)
Input
Potential cases of Carpal-tunnel-syndrome
⇣
Step
output
'output-cases'
Output cases
Select implementation:
python
VIEW
⇣
Output
Output containing patients flagged as having this type of Carpal-tunnel-syndrome (csv)