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'Benign-neoplasm-of-colon-rectum-anus-and-anal-canal' phenotype
jiRbp6uJfASuDXyQSDrsdc - Benign neoplasm of colon, rectum, anus and anal canal
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caliber
Input
Potential cases of Benign-neoplasm-of-colon-rectum-anus-and-anal-canal
⇣
Step
load
'read-potential-cases-disc'
Read potential cases from disc
Select implementation:
python
js
VIEW
Switch to:
read-potential-cases-i2b2
,
read-potential-cases-omop
,
read-potential-cases-fhir
.
⇣
Output
Initial potential cases, read from disc. (csv)
Input
Potential cases of Benign-neoplasm-of-colon-rectum-anus-and-anal-canal
⇣
Step
logic
'benign-neoplasm-of-colon-rectum-anus-and-anal-canal-polypectomy---primary'
Identify Benign neoplasm of colon rectum anus and anal canal polypectomy - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Benign-neoplasm-of-colon-rectum-anus-and-anal-canal related events in electronic health record. (csv)
Input
Potential cases of Benign-neoplasm-of-colon-rectum-anus-and-anal-canal
⇣
Step
logic
'benign-neoplasm-of-colon-rectum-anus-and-anal-canal-excision---primary'
Identify Benign neoplasm of colon rectum anus and anal canal excision - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Benign-neoplasm-of-colon-rectum-anus-and-anal-canal related events in electronic health record. (csv)
Input
Potential cases of Benign-neoplasm-of-colon-rectum-anus-and-anal-canal
⇣
Step
logic
'benign-neoplasm-of-colon-rectum-anus-and-anal-canal-flexure---primary'
Identify Benign neoplasm of colon rectum anus and anal canal flexure - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Benign-neoplasm-of-colon-rectum-anus-and-anal-canal related events in electronic health record. (csv)
Input
Potential cases of Benign-neoplasm-of-colon-rectum-anus-and-anal-canal
⇣
Step
logic
'benign-neoplasm-of-colon-rectum-anus-and-anal-canal---primary'
Identify Benign neoplasm of colon rectum anus and anal canal - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Benign-neoplasm-of-colon-rectum-anus-and-anal-canal related events in electronic health record. (csv)
Input
Potential cases of Benign-neoplasm-of-colon-rectum-anus-and-anal-canal
⇣
Step
logic
'benign---primary'
Identify Benign - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Benign-neoplasm-of-colon-rectum-anus-and-anal-canal related events in electronic health record. (csv)
Input
Potential cases of Benign-neoplasm-of-colon-rectum-anus-and-anal-canal
⇣
Step
logic
'benign---secondary'
Identify Benign - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Benign-neoplasm-of-colon-rectum-anus-and-anal-canal related events in electronic health record. (csv)
Input
Potential cases of Benign-neoplasm-of-colon-rectum-anus-and-anal-canal
⇣
Step
logic
'benign-neoplasm-of-colon-rectum-anus-and-anal-canal-polyp---secondary'
Identify Benign neoplasm of colon rectum anus and anal canal polyp - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Benign-neoplasm-of-colon-rectum-anus-and-anal-canal related events in electronic health record. (csv)
Input
Potential cases of Benign-neoplasm-of-colon-rectum-anus-and-anal-canal
⇣
Step
output
'output-cases'
Output cases
Select implementation:
python
VIEW
⇣
Output
Output containing patients flagged as having this type of Benign-neoplasm-of-colon-rectum-anus-and-anal-canal (csv)