phenoflow
BROWSE
DEFINE
EDIT
LOGOUT
© kclhi 2020
'Agranulocytosis' phenotype
n6BbN4xqnikRVdAqPZeCiV - Agranulocytosis
DOWNLOAD
Loading...
|
Get DOI
Loading...
caliber
Input
Potential cases of Agranulocytosis
⇣
Step
external
'read-potential-cases-i2b2'
Read potential cases from i2b2
Select implementation:
js
VIEW
Switch to:
read-potential-cases-disc
,
read-potential-cases-omop
,
read-potential-cases-fhir
.
⇣
Output
Initial potential cases, read from i2b2. (csv)
Input
Potential cases of Agranulocytosis
⇣
Step
logic
'agranulocytosis-leucopenia---primary'
Identify Agranulocytosis leucopenia - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Agranulocytosis related events in electronic health record. (csv)
Input
Potential cases of Agranulocytosis
⇣
Step
logic
'agranulocytosis---primary'
Identify Agranulocytosis - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Agranulocytosis related events in electronic health record. (csv)
Input
Potential cases of Agranulocytosis
⇣
Step
logic
'agranulocytosis-neutropenia---primary'
Identify Agranulocytosis neutropenia - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Agranulocytosis related events in electronic health record. (csv)
Input
Potential cases of Agranulocytosis
⇣
Step
logic
'idiopathic-agranulocytosis---primary'
Identify Idiopathic Agranulocytosis - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Agranulocytosis related events in electronic health record. (csv)
Input
Potential cases of Agranulocytosis
⇣
Step
logic
'agranulocytosis-induced---primary'
Identify Agranulocytosis induced - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Agranulocytosis related events in electronic health record. (csv)
Input
Potential cases of Agranulocytosis
⇣
Step
logic
'agranulocytosis-acquired---primary'
Identify Agranulocytosis acquired - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Agranulocytosis related events in electronic health record. (csv)
Input
Potential cases of Agranulocytosis
⇣
Step
logic
'agranulocytosis-kostmann's---primary'
Identify Agranulocytosis kostmann's - primary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Agranulocytosis related events in electronic health record. (csv)
Input
Potential cases of Agranulocytosis
⇣
Step
logic
'agranulocytosis---secondary'
Identify Agranulocytosis - secondary
Select implementation:
python
VIEW
⇣
Output
Patients with clinical codes indicating Agranulocytosis related events in electronic health record. (csv)
Input
Potential cases of Agranulocytosis
⇣
Step
output
'output-cases'
Output cases
Select implementation:
python
VIEW
⇣
Output
Output containing patients flagged as having this type of Agranulocytosis (csv)