caliber
InputPotential cases of Smoking-Status
Step

external
'read-potential-cases-i2b2'
Read potential cases from i2b2
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OutputInitial potential cases, read from i2b2. (csv)
InputPotential cases of Smoking-Status
Step

logic
'smoking-status-tobacco---primary'
Identify Smoking Status tobacco - primary
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OutputPatients with clinical codes indicating Smoking-Status related events in electronic health record. (csv)
InputPotential cases of Smoking-Status
Step

logic
'smoking-status-nonsmoker---primary'
Identify Smoking Status nonsmoker - primary
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OutputPatients with clinical codes indicating Smoking-Status related events in electronic health record. (csv)
InputPotential cases of Smoking-Status
Step

logic
'smoking-status-exsmoker---primary'
Identify Smoking Status exsmoker - primary
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OutputPatients with clinical codes indicating Smoking-Status related events in electronic health record. (csv)
InputPotential cases of Smoking-Status
Step

logic
'smoking-status-administration---primary'
Identify Smoking Status administration - primary
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OutputPatients with clinical codes indicating Smoking-Status related events in electronic health record. (csv)
InputPotential cases of Smoking-Status
Step

logic
'smoking-status---primary'
Identify Smoking Status - primary
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OutputPatients with clinical codes indicating Smoking-Status related events in electronic health record. (csv)
InputPotential cases of Smoking-Status
Step

logic
'smoking-status-tobacco---secondary'
Identify Smoking Status tobacco - secondary
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OutputPatients with clinical codes indicating Smoking-Status related events in electronic health record. (csv)
InputPotential cases of Smoking-Status
Step

output
'output-cases'
Output cases
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OutputOutput containing patients flagged as having this type of Smoking-Status (csv)